Hari Krishna Yalamanchili

From Msplacements

E-mail: harikrishna@research.iiit.ac.in
Contact No: +91 9912894961

Career objectives
To be a starter in innovation and be the one to put the first brick in place by utilizing my skills to the fullest in order to develop novel and robust solutions in favour of organization thereby joined.

Education

  • Master of Science by Research in Computer Science & Bioinformatics, International Institute of Information Technology, Hyderabad, July 2007 – Present, C.G.P.A - 8.8.
  • B.Tech(Bioinformatics), Jaypee University of Information Technology,Waknaghat (Solan), H.P,July 2003 - May 2007,Percentage 81%.
  • Intermediate,Geetanjili Junior College, Vijayawada, A.P, 2001-2003,Percentage 87.8%.
  • Secondary, Adarsh Public School, Tenali, A.P, 2000-2001, 83.3%.

Career Interests

  • Network and Web link mining
  • Cloud / Cluster Computing
  • Computational and Systems biology
  • Scale free and Small world networks
  • Comparative Genomics


Technical Skill Set

  • Programming Languages  : GNU/C, GNU/C++, Core Java.
  • Scripting Languages  : Perl, Python
  • Databases  : MySQL, Oracle8i/9i, MSSQL
  • Web Technologies  : HTML, PHP, CGI
  • Operating Systems  : GNU/Linux, Windows 98/XP.

Primary Research & MS Thesis

  • Graph Spectral Approach for Identifying Domains (Clusters) and Repeats (Patterns) in Protein Contact Networks (Graphs).

Publications

  • Graph Spectral Approach for Identifying Protein Domains - Proceedings of International Conference on Bioinformatics and Computational biology, BICoB 2009.
  • Comparative structure analysis of Chorismate synthase - Published in Online Journal of Bioinformatics,(7 (1) : 35-45, 2006)2008.
  • Submitted the protein sequence of Chorismate synthase in Thermodesulfobacterium commune to NCBI. Accession ID: CAJ15657.
  • Protein Contact Networks and mining - Published in Proceedings of National Symposiumon Cellular and Molecular Biophysics, January 22-24, 2009.

Projects

  • Maximizing the Cloud performance by Virtualization (VMware)
  • Implemented Graph mining techniques on Cloud (cluster computing) using hadoop.
  • Tool for Identifying Community structure in World Wide Web, Implemented in C++.
  • Designed a new algorithm called “2Phase Clustering” for graphs, Implemented in C++.
  • Web Crawler and Search engine based on the Web Graph, Implemented in C++.
  • Developed a Tool for In Silico Drug Target Identification on .NET framework using Perl, Java and VB script.
  • Implementation of algorithm: HMM and Markov model for prediction of introns and exons in C++.
  • Implementation of Vitterbi, Profile Graphs, Forward & Backward algorithms for Profile generation algorithms in C++.
  • Database management system: (3 months) “Therapeutic Target Database” using MySql and php.
  • Identification and Docking of Malarial Targets like Plasmepsin 1/2, HRP II and PfEMP1 with E-64 inhibitor.

Work Experience

  • Working in Center for Computational Natural Science and Bioinformatics, IIIT-H as a Research Assistant, 07/2007 to Present.
  • Teaching Assistant for Problem solving and Programming (C/C++)Course, Monsoon 2008.
  • Teaching Assistant for Advanced Bioinformatics Course, Spring 2008.
  • Teaching Assistant for Introduction to Bioinformatics Course, Monsoon 2008.

Workshops/Conferences

  • Attended the Microsoft Research India’s “Tech Vista 2008”
  • Attended HYSEA Workshop on Cloud Computing 2008 @ Google, Hyderabad, India on 23rd August, 2008.
  • Attended a Workshop on Cloud Computing conducted @ Amazon, Hyderabad on 25th September 2008.


Course work

Web Data Mining and Knowledge Management, Advanced Topics in Software Architecture, Database Management Systems, Algorithms and Data Structures, Computer Networks, Artificial Intelligence, Machine learning in Bioinformatics, Advanced Bioinformatics, Computational biology, Genomics & Proteomics etc..

Achievements

  • Winner of the Chromozone-07, a National level Bioinformatics Challenge, to solve a Profile building problem on a given data set, in the least time.
  • Selected as a Resource person in the AICTE (All India Council for Technical Education) sponsored workshop on Structure Based Drug Design at Jaypee University of Information Technology.
  • Best Paper Award in National symposiums at VTF (Vignyan Technical Fest) on Insilico drug target identification.
  • Top 1% in the State Level Science Talent Test.

Extra-Curricular Activities

  • Philately
  • New product design & development
  • Active in organizing various Social services like Asha Kiran (A voluntary organization started by IIIT-H to provide education to economically poor students), Blood Donation Camps etc.

Personal Profile

  • Date of Birth: 11th June, 1986
  • Nationality: Indian
  • Languages: Telugu, English and Hindi
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